Preheat the oven to 425°F (220°C).
Add dry rotini pasta, water, marinara sauce, thawed meatballs, chopped bell pepper, and salt directly into a 9×13-inch baking dish.
Stir the ingredients together until the pasta is evenly coated with sauce and the meatballs are distributed throughout the dish.
Cover the baking dish tightly with aluminum foil and bake for 30–35 minutes, until the pasta is tender and cooked al dente.
Remove the foil and stir in 1 cup of shredded mozzarella cheese, mixing it throughout the pasta and sauce.
Sprinkle the remaining 1 cup of mozzarella cheese and Parmesan cheese evenly over the top.
Return the casserole to the oven uncovered and bake for about 10 minutes, until the cheese is melted and lightly bubbly.
Garnish with chopped fresh parsley or basil if desired, then serve warm.